PS2 Controller L1 is always the Home Button for Classic Controller

[lelouch345]

I have Dolphin 3.0 458 dirty and I use a Dualshock 3 controller with Motion Joy. I have tried playing pandora's tower and Last Story and the L1 button is always set to home and it drives me insane. I have used classic controller set-up and mapped everything with a different button. I have a Samsung Series 5 Core i7 Radeon Graphics card. Idk if any of this will help but this is driving me nuts. Help. Please and Thanks

[Shonumi]

What do your controller settings look like in Dolphin? You should post them as a screenshot so we can get a better idea of how you configured your controller.