Controls Not Registering In-Game

[SaintDuck]

I've seen prior threads on the subjects and all have been resolved for the OP, however in my case all solutions haven't worked. When in-game (specifically Legend of Zelda: Twilight Princess) controls that I configured for an xbox 360 controller profile don't work. I've configured the controls in both gamecube port 1 as well as configured an emulated wii remote with the classic controller extention, to no avail. I'll post screenshots of my configurations alongside this. Prior revisions didn't have this issue specifically when playing Xenoblade a couple months ago. I tried XC again today and the problem persists even for that game.